Institutional Repository
Thesis Issued 2026-09-08 EN

Molecular and pathogenic characterization of Newcastle disease virus circulating in Bangladesh

Author: Lalita Rani Barman

Abstract

Outbreaks of different diseases are the major constraints in poultry farming in Bangladesh. Newcastle disease (ND), popularly known as Ranikhet disease, is one of the major diseases that can cause severe damage to the poultry farming. Very little is known about the genetic characteristics of Newcastle disease virus (NDV) circulating in Bangladesh. The present study focused on the detection and genotypic characterization of NDV of chickens from two wholesale live bird markets (LBMs) as well as from field outbreaks, and sequential pathology in chickens on experimental infection. A total of 513 dead chickens were collected from Kaptan Bazar and Karwan Bazar LBM of Dhaka city during the period from August 2011 to July 2012. The carcasses were first screened for type A influenza virus using a rapid antigen test kit and a piece of tracheal tissue was collected from representative samples for molecular characterization of the avian influenza virus (AIV). Influenza rapid test negative samples (n=420) were subjected to routine necropsy and pooled tissue samples of the trachea, lungs, spleen, proventriculus and caecal tonsils were collected from ND suspected carcasses. In addition 18 ND suspected samples were received from field outbreaks. Moreover 10 haemagglutination-positive but AIV-negative samples of migratory birds were also received from Bangladesh Livestock Research Institute. All samples were tested for the detection and molecular characterization of AIV and NDV by RT-PCR and real time RT-PCR (rRT-PCR). A selected NDV isolate from a chicken was used for sequential pathogenicity study in chickens on experimental infection. A pigeon isolate of NDV from a previous study was also used for comparison. Out of 513 dead birds from LBM, 93 (18.21%) were positive for AIV in rapid antigen test and 85 (16.56%) were suspected at necropsy to have died of ND. Samples were collected from 80 out of 85 ND suspected carcasses. On PCR analysis, 59 out of 80 ND suspected samples were positive for NDV, of which 18 were found to be concurrently infected with NDV and AIV; and among the remaining 21 NDV negative samples 6 were positive for AIV. All the 18 ND suspected samples from field outbreaks and 10 migratory bird samples were positive for NDV. Nucleotide sequences of a 535 bp fragment of F gene of 19 selected NDV isolates were established. Phylogenetic analysis revealed that all Bangladeshi isolates belonged to the currently spreading genotype XIII, however, they formed two separate clusters away from previously described subgenotype XIIIa and XIIIb with a nucleotide divergence of 5.8% to 6.7% and having two and six unique amino acid residues, respectively. These two groups of Bangladeshi isolates might have evolved into two new sub-genotypes and are proposed to be designated as sub-genotype XIIIc and XIIId. In the experimental pathogenicity study the chicken isolate was found to be highly pathogenic for chickens. The visceral lesions were typical of velogenic viscerotropic NDV. Progressive necrosis and depletion of lymphocytes in various lymphoid organs were seen. Kidney tubular necrosis with karyorrhexis appeared to be a novel finding. However, the pigeon isolate produced minimum gross lesions; the microscopic lesions were also less severe. Both the chicken and pigeon isolates produced lesions in the brain. However, the brain lesions were more pronounced with the pigeon isolate. The information generated in the present study on genotypic and pathogenic properties of currently circulating NDV strains of Bangladesh would help developing a better vaccine candidate for controlling ND and better understanding of the pathogenesis of the disease.